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The Growth Curve Model for High Dimensional Data and its Application in Genomics

Sayantee Jana-2013-04-01-MacSphere (McMaster University)

TL;DRAbstract

Recent advances in technology have allowed researchers to collect high-dimensional biological data simultaneously. In genomic studies, for instance, measurements from tens of thousands of genes are taken from individuals across several experimental groups. In time course microarray experiments, gene expression is measured at several time points for each individual across the whole genome resulting in massive amount of data. In such experiments, researchers are faced with two types of high-dimensionality. The first is global high-dimensionality, which is common to all genomic experiments. The global high-dimensionality arises because inference is being done on tens of thousands of genes resulting in multiplicity. This challenge is often dealt with statistical methods for multiple comparison, such as the Bonferroni correction or false discovery rate (FDR). We refer to the second type of high-dimensionality as gene specific high-dimensionality, which arises in time course microarry experi

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Recent advances in technology have allowed researchers to collect high-dimensional biological data simultaneously. In genomic studies, for instance, measurements from tens of thousands of genes are taken from individuals across several experimental groups. In time course microarray experiments, gene expression is measured at several time points for each individual across the whole genome resulting in massive amount of data. In such experiments, researchers are faced with two types of high-dimensionality. The first is global high-dimensionality, which is common to all genomic experiments. The global high-dimensionality arises because inference is being done on tens of thousands of genes resulting in multiplicity. This challenge is often dealt with statistical methods for multiple comparison, such as the Bonferroni correction or false discovery rate (FDR). We refer to the second type of high-dimensionality as gene specific high-dimensionality, which arises in time course microarry experi

Keywords

GenomicsComputational biologyComputer scienceData scienceGrowth curve (statistics)BiologyMathematicsGenetics

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