Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4
2023 · Nature Biotechnology · 1,142 citations
https://doi.org/10.1038/s41587-023-01688-w
F
Fabio Cumbo
Cleveland Clinic(US)
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Fabio Cumbo is an academic researcher from Cleveland Clinic. The author has contributed to research in topics: Gut microbiota and health & Probiotics and Fermented Foods & Genomics and Phylogenetic Studies. The author has an h-index of 22, co-authored 97 publications.
ORCID: 0000-0003-2920-5838Papers by this author
worksThe Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update
2024 · Nucleic Acids Research · 691 citations
https://doi.org/10.1093/nar/gkae410
The person-to-person transmission landscape of the gut and oral microbiomes
2023 · Nature · 418 citations
https://doi.org/10.1038/s41586-022-05620-1
A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity
2020 · Nature Communications · 211 citations
https://doi.org/10.1038/s41467-020-19929-w
MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice
2023 · Cell Reports · 37 citations
https://doi.org/10.1016/j.celrep.2023.112464
Neuroblastoma is associated with alterations in gut microbiome composition subsequent to maternal microbial seeding
2023 · EBioMedicine · 13 citations
https://doi.org/10.1016/j.ebiom.2023.104917
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