De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
2013 · Nature Protocols · 8,740 citations
https://doi.org/10.1038/nprot.2013.084
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Philip D. Blood
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Philip D. Blood is an academic researcher from Pittsburgh Supercomputing Center. The author has contributed to research in topics: Genomics and Phylogenetic Studies & Scientific Computing and Data Management & Single-cell and spatial transcriptomics. The author has an h-index of 17, co-authored 40 publications.
ORCID: 0000-0002-9129-1223Papers by this author
worksCritical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
2017 · Nature Methods · 928 citations
https://doi.org/10.1038/nmeth.4458
Novel transcriptome assembly and improved annotation of the whiteleg shrimp (Litopenaeus vannamei), a dominant crustacean in global seafood mariculture
2014 · Scientific Reports · 104 citations
https://doi.org/10.1038/srep07081
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage
2025 · Nature Methods · 23 citations
https://doi.org/10.1038/s41592-024-02563-5
The Pacific Biosciences de novo assembled genome dataset from a parthenogenetic New Zealand wild population of the longhorned tick, Haemaphysalis longicornis Neumann, 1901
2019 · Data in Brief · 20 citations
https://doi.org/10.1016/j.dib.2019.104602
Raw pacific biosciences and illumina sequencing reads and assembled genome data for the cattle ticks Rhipicephalus microplus and Rhipicephalus annulatus
2021 · Data in Brief · 13 citations
https://doi.org/10.1016/j.dib.2021.106852
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